|
1
|
{
|
|
2
|
"@type" : "http://purl.obolibrary.org/obo/GENO_0000512",
|
|
3
|
"@context" : "http://10.15.55.128/ae/api/context/doc.jsonld",
|
|
4
|
"@id" : "http://reg.genome.network/allele/CA11267175",
|
|
5
|
"Subject" : "CA11267175",
|
|
6
|
"Chromosome" : "chr2",
|
|
7
|
"Position" : 129534057,
|
|
8
|
"Reference Allele" : "C",
|
|
9
|
"Alternative Allele" : "T",
|
|
10
|
"dbSNP Identifier" : "rs79901601",
|
|
11
|
"Is On Heterogenous CpG" : true,
|
|
12
|
"Number Tissues Variant Found In" : 1,
|
|
13
|
"Tissues" : [
|
|
14
|
"Penis, Foreskin, Melanocyte Primary Cells"
|
|
15
|
],
|
|
16
|
"Number Experiment Types Variant Found In" : 1,
|
|
17
|
"Experiments" : [
|
|
18
|
"Bisulfite-Seq"
|
|
19
|
],
|
|
20
|
"Number Patients Variant Found In" : 1,
|
|
21
|
"Patients" : [
|
|
22
|
"skin03"
|
|
23
|
],
|
|
24
|
"Tissue Specific Analysis" : [
|
|
25
|
{
|
|
26
|
"TissueID" : "Penis, Foreskin, Melanocyte Primary Cells",
|
|
27
|
"ExperimentID" : "Bisulfite-Seq",
|
|
28
|
"PatientID" : "skin03",
|
|
29
|
"Ref Allele Unmethylated CpG Count" : 0,
|
|
30
|
"Ref Allele Methylated CpG Count" : 3,
|
|
31
|
"Alt Allele Unmethylated CpG Count" : 1,
|
|
32
|
"Alt Allele Methylated CpG Count" : 2,
|
|
33
|
"Methylation Difference" : 0.3333,
|
|
34
|
"Raw P-value" : 1.0,
|
|
35
|
"FDR P-value" : 1.0
|
|
36
|
}
|
|
37
|
],
|
|
38
|
"DocID" : "AE0201001"
|
|
39
|
}
|