Bringing exRNA Data and Analysis Tools Together

The exRNA Atlas is the data repository of the Extracellular RNA Communication Consortium (ERCC). The repository includes small RNA sequencing and qPCR-derived exRNA profiles from human and mouse biofluids. All RNA-seq datasets are processed using version 4 of the exceRpt small RNA-seq pipeline (Rozowsky et al., 2019) and ERCC-developed quality metrics are uniformly applied to these datasets. If you're interested in submitting your RNA-seq or qPCR data to the Atlas, view our Submission Guide.

Above, in the upper right corner of this panel, you can use the ncRNA search bar to search the exRNA Atlas data for specific ncRNAs of interest. If your browser window is smaller, you will need to click the "hamburger" options icon to reveal the ncRNA search bar.

Getting Started
Select exRNA Profiles: (0 selected)
Select, view and download Atlas data by clicking one or more slices from one or more charts. Then, click the Search icon in the floating menubar to apply filters and view the results (grid opens in a new tab). Click the SelectAll icon to select all slices from all charts (i.e., all exRNA profiles in the Atlas) or click the DeselectAll icon to clear selections. Please note that the size of each slice (representing a profile count) has been log-transformed.
Overview of Studies
PI Name Organization Study Title Samples Published? Other Databases
Atlas Statistics exRNA Atlas Wiki

* QC standards for saliva are under revision.


Samples Processed
<3 Months Ago 0
3 to <6 Months Ago 0
6 to <12 Months Ago 0
≥12 Months Ago 5,309
Total: 5,309
Reads (Billions) Processed
<3 Months Ago 0.00
3 to <6 Months Ago 0.00
6 to <12 Months Ago 0.00
≥12 Months Ago 23.44
Total: 23.44
Datasets Processed
<3 Months Ago 0
3 to <6 Months Ago 0
6 to <12 Months Ago 0
≥12 Months Ago 20
Total: 20
(New) Conditions Processed
<3 Months Ago 0
3 to <6 Months Ago 0
6 to <12 Months Ago 0
≥12 Months Ago 23
Total: 23
  • v4.13.6 Atlas released - exRNA Atlas Published in Cell. (2019-04-04)
  • v4.13.0 Atlas released - New Deconvolution Results. (2018-04-23)
  • v4.11.0 Atlas released - View your own analysis results in the Atlas. (2018-03-01)
  • v4.9.0 Atlas released - 3242 new exRNA profiles (over 5000 profiles in total!). (2017-10-20)
  • v4.8.0 Atlas released - New ncRNA Search Bar. (2017-08-17)
  • More...