Atlas Census Help

The table above summarizes the frequency of your selected ncRNAs in the Atlas' RNA-seq data.
Note that the census was last run on 2017/10/20, so newer samples will be missing from the table above.
We will update the census in the near future to take these newer samples into account.

• Each row in the table corresponds to a selected ncRNA.
• Each column in the table corresponds to a biofluid found in the Atlas.
• The number of samples present for each biofluid is displayed below the name of the biofluid.
• A checkmark in a given cell indicates that the ncRNA was expressed in that biofluid according to the provided parameters.
• The absence of a checkmark does not mean that the ncRNA was not expressed in that biofluid.
• Click a biofluid's column header to sort your results by that biofluid.

Below, you can learn more about the different parameters for the table:

• RPM Threshold: For a given ncRNA in a given sample, what RPM (reads per million mapped reads) is required in order for that ncRNA to be considered expressed?
• Sample Percentile: For a given ncRNA in a given biofluid, the sample percentile controls the percentage of samples
  that must meet the RPM threshold in order for that ncRNA to be considered expressed in that biofluid.
• Sample Type: This option allows you to pick different subsets of the Atlas data when generating the table.
  For example, if you choose "Healthy Samples", only healthy samples will be used when generating the table.
  The number of samples below each biofluid will be updated accordingly.

These parameters will normally be displayed above the table. However, if your browser window isn't large enough to fit the parameters,
a "hamburger" menu will be made available in the upper right corner. Simply click the hamburger icon () to reveal the different parameters.

Census integrated into the exRNA Atlas by William Thistlethwaite and Rocco Lucero at the Bioinformatics Research Lab, Baylor College of Medicine, Houston, TX.